EnhancerDB
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  3. rs140357534[chr1:224384785]
Enhancers that have rs140357534[chr1:224384785]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs140357534[chr1:224384785]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224384369 224384819 TCF7L2 GTRD no Colon (HCT116) 21384194
chr1 224384768 224384787 REST JASPAR yes 35692559
chr1 224384779 224384800 IRF1 JASPAR yes 35692561
Genes associated with rs140357534[chr1:224384785], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More