EnhancerDB
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  3. rs140392008[chr1:2189529]
Enhancers that have rs140392008[chr1:2189529]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140392008[chr1:2189529]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2188814 2190965 TCF7L2 GTRD no Colon (HCT116) 107801816
chr1 2189518 2189539 ZNF263 JASPAR yes 26228279
chr1 2189524 2189534 TBX21 JASPAR yes 26228281
chr1 2189524 2189535 TBX20 JASPAR yes 26228282
chr1 2189524 2189537 EOMES JASPAR yes 26228283
Genes associated with rs140392008[chr1:2189529], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More