EnhancerDB
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  3. rs140394366[chr12:122238278]
Enhancers that have rs140394366[chr12:122238278]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122219767 122240055 enh2650
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs140394366[chr12:122238278]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122229445 122242257 POLR2A UCSC Txn Factor no Conserved 108065674
chr12 122238266 122238278 ZBTB7B JASPAR yes 124248275
chr12 122238266 122238278 ZBTB7C JASPAR yes 124248276
chr12 122238268 122238282 GLIS2 JASPAR yes 124248277
chr12 122238268 122238282 GLIS3 JASPAR yes 124248278
chr12 122238268 122238282 ZIC1 JASPAR yes 124248279
chr12 122238268 122238283 ZIC4 JASPAR yes 124248280
chr12 122238271 122238280 SP1 TRANSFAC yes 124248281
chr12 122238272 122238278 SP1 TRANSFAC yes 124248282
chr12 122238272 122238282 SP1 JASPAR yes 124248283
chr12 122238273 122238280 SP1 TRANSFAC yes 124248284
chr12 122238274 122238279 SP1 TRANSFAC yes 124248285
chr12 122238274 122238280 SP1 TRANSFAC yes 124248286
Genes associated with rs140394366[chr12:122238278], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More