EnhancerDB
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  3. rs140401310[chr16:89380694]
Enhancers that have rs140401310[chr16:89380694]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140401310[chr16:89380694]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89380391 89381065 ZNF274 GTRD no Blood (GM12878) 21738056
chr16 89380391 89381065 ZNF274 GTRD no Blood (GM12878) 108225499
chr16 89380522 89381458 TCF7L2 GTRD no Colon (HCT116) 21738057
chr16 89380522 89381458 TCF7L2 GTRD no Colon (HCT116) 108225500
chr16 89380548 89381204 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21738058
chr16 89380548 89381204 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108225501
chr16 89380635 89381235 ZNF143 GTRD no Epithelial (MCF-7) 21738059
chr16 89380635 89381235 ZNF143 GTRD no Epithelial (MCF-7) 108225502
chr16 89380660 89381327 TCF7L2 GTRD no Colon (HCT116) 21738060
chr16 89380660 89381327 TCF7L2 GTRD no Colon (HCT116) 108225503
chr16 89380661 89381074 TCF7L2 GTRD no Colon (HCT116) 21738061
chr16 89380661 89381074 TCF7L2 GTRD no Colon (HCT116) 108225504
chr16 89380675 89380695 RREB1 JASPAR yes 12329960
chr16 89380678 89380698 RREB1 JASPAR yes 12329961
chr16 89380680 89380700 RREB1 JASPAR yes 12329962
chr16 89380683 89380703 RREB1 JASPAR yes 12329963
chr16 89380689 89380704 RUNX2 JASPAR yes 12329964
chr16 89380690 89380699 RUNX2 JASPAR yes 12329965
chr16 89380690 89380700 RUNX3 JASPAR yes 12329966
chr16 89380690 89380701 RUNX1 JASPAR yes 12329967
Genes associated with rs140401310[chr16:89380694], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More