EnhancerDB
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  3. rs140416316[chr12:52675339]
Enhancers that have rs140416316[chr12:52675339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52669305 52679150 enh14728
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs140416316[chr12:52675339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52673448 52675850 POLR2A UCSC Txn Factor no Conserved 108033834
chr12 52673448 52675850 POLR2A UCSC Txn Factor no Conserved 108033835
chr12 52674312 52675566 ZNF274 GTRD no Bone Marrow (K562) 21546938
chr12 52674312 52675566 ZNF274 GTRD no Bone Marrow (K562) 108033912
chr12 52674312 52675566 ZNF274 GTRD no Bone Marrow (K562) 108033913
chr12 52675009 52675393 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546973
chr12 52675009 52675393 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033968
chr12 52675029 52675339 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033969
chr12 52675335 52675346 FLI1 JASPAR yes 120934406
chr12 52675336 52675350 ZIC1 JASPAR yes 120934407
chr12 52675336 52675351 ZIC3 JASPAR yes 120934408
chr12 52675337 52675345 EHF JASPAR yes 120934409
Genes associated with rs140416316[chr12:52675339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More