EnhancerDB
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  3. rs140477476[chr17:38768790]
Enhancers that have rs140477476[chr17:38768790]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38750565 38781175 enh17142
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs140477476[chr17:38768790]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257638
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257639
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257640
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257641
chr17 38765393 38769819 ZBTB33 GTRD no Lung (A549) 108257651
chr17 38767229 38769908 ZBTB33 GTRD no Lung (A549) 108257652
chr17 38767321 38769208 ZBTB33 GTRD no Lung (A549) 108257653
chr17 38767347 38769123 ZNF274 GTRD no Blood (GM12878) 21756719
chr17 38767347 38769123 ZNF274 GTRD no Blood (GM12878) 108257654
chr17 38768777 38768792 FOXP1 JASPAR yes 54232020
chr17 38768778 38768799 IRF1 JASPAR yes 54232021
chr17 38768782 38768797 STAT2 JASPAR yes 54232022
Genes associated with rs140477476[chr17:38768790], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More