EnhancerDB
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  3. rs140478554[chr5:148293082]
Enhancers that have rs140478554[chr5:148293082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148282079 148299015 enh22690
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs140478554[chr5:148293082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148293077 148293088 CDX2 JASPAR yes 66773060
chr5 148293079 148293089 HOXA13 JASPAR yes 66773061
chr5 148293080 148293092 FOXI1 JASPAR yes 66773062
Genes associated with rs140478554[chr5:148293082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More