EnhancerDB
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  3. rs140485791[chr12:52607567]
Enhancers that have rs140485791[chr12:52607567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs140485791[chr12:52607567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 21546725
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 108033682
chr12 52607109 52607769 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546726
chr12 52607139 52607715 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546727
chr12 52607154 52607618 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546728
chr12 52607178 52607642 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546730
chr12 52607218 52607578 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546731
chr12 52607237 52607621 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546733
chr12 52607239 52607635 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546734
chr12 52607242 52607612 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546736
chr12 52607256 52607594 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546738
chr12 52607264 52607570 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546739
chr12 52607273 52607593 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546740
chr12 52607275 52607599 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21546741
chr12 52607275 52607651 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546742
chr12 52607306 52607626 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546746
chr12 52607310 52607600 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546747
chr12 52607317 52607589 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546748
chr12 52607319 52607590 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546749
chr12 52607436 52608287 ZNF143 GTRD no Epithelial (MCF-7) 21546751
chr12 52607463 52608228 ZNF143 GTRD no Epithelial (MCF-7) 21546752
chr12 52607494 52608065 ZNF143 GTRD no Epithelial (MCF-7) 21546753
chr12 52607497 52608217 ZNF143 GTRD no Epithelial (MCF-7) 21546754
chr12 52607501 52608050 ZNF143 GTRD no Epithelial (MCF-7) 21546755
chr12 52607567 52607572 SP1 TRANSFAC yes 120928810
chr12 52607567 52607576 HIC2 JASPAR yes 120928811
Genes associated with rs140485791[chr12:52607567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More