EnhancerDB
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  3. rs140489146[chr1:25030576]
Enhancers that have rs140489146[chr1:25030576]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140489146[chr1:25030576]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25017364 25039918 ZNF274 GTRD no Blood (GM12878) 21325292
chr1 25030573 25030588 FOXP1 JASPAR yes 27520411
chr1 25030574 25030589 FOXP1 JASPAR yes 27520412
chr1 25030575 25030590 FOXP1 JASPAR yes 27520413
chr1 25030576 25030591 FOXP1 JASPAR yes 27520414
chr1 25030576 25030597 IRF1 JASPAR yes 27520415
Genes associated with rs140489146[chr1:25030576], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More