EnhancerDB
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  3. rs140507540[chr12:52834832]
Enhancers that have rs140507540[chr12:52834832]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52827009 52839071 enh14730
Skin (Keratinocyte) Prostate (PC-3) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs140507540[chr12:52834832]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52833401 52837697 ZNF143 GTRD no Epithelial (MCF-7) 21547040
chr12 52833401 52837697 ZNF143 GTRD no Epithelial (MCF-7) 108033982
chr12 52834068 52835694 ZNF143 GTRD no Epithelial (MCF-7) 21547042
chr12 52834068 52835694 ZNF143 GTRD no Epithelial (MCF-7) 108033983
chr12 52834388 52834869 ZNF143 GTRD no Epithelial (MCF-7) 21547043
chr12 52834529 52835192 ZNF143 GTRD no Epithelial (MCF-7) 21547044
chr12 52834529 52835192 ZNF143 GTRD no Epithelial (MCF-7) 108033984
chr12 52834539 52835306 ZNF143 GTRD no Epithelial (MCF-7) 21547045
chr12 52834539 52835306 ZNF143 GTRD no Epithelial (MCF-7) 108033985
chr12 52834829 52834838 SOX9 JASPAR yes 120941250
chr12 52834831 52834840 SRY JASPAR yes 120941251
chr12 52834831 52834843 FOXC2 JASPAR yes 120941252
Genes associated with rs140507540[chr12:52834832], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More