EnhancerDB
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  3. rs140513447[chr16:89411805]
Enhancers that have rs140513447[chr16:89411805]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs140513447[chr16:89411805]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89408636 89411957 ZNF274 GTRD no Blood (GM12878) 21738295
chr16 89408636 89411957 ZNF274 GTRD no Blood (GM12878) 21738296
chr16 89408636 89411957 ZNF274 GTRD no Blood (GM12878) 108225756
chr16 89410149 89411882 ZNF143 GTRD no Epithelial (MCF-7) 21738299
chr16 89410149 89411882 ZNF143 GTRD no Epithelial (MCF-7) 108225759
chr16 89410748 89411807 ZNF143 GTRD no Epithelial (MCF-7) 21738339
chr16 89410748 89411807 ZNF143 GTRD no Epithelial (MCF-7) 108225801
Genes associated with rs140513447[chr16:89411805], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 89773542 89787394 - VPS9D1 ENSG00000075399.8 89787394 361737 Liver 0.134168 15186