EnhancerDB
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  3. rs140577709[chr1:225946667]
Enhancers that have rs140577709[chr1:225946667]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140577709[chr1:225946667]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225945436 225946685 SOX2 GTRD no Neural Stem Cells (H9) 21385791
chr1 225946649 225946670 IRF1 JASPAR yes 35768315
chr1 225946653 225946667 STAT1 JASPAR yes 35768319
chr1 225946653 225946668 STAT2 JASPAR yes 35768320
chr1 225946658 225946672 IRF7 JASPAR yes 35768321
chr1 225946666 225946672 TBP TRANSFAC yes 35768322
Genes associated with rs140577709[chr1:225946667], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More