EnhancerDB
  1. Home
  2. SNP
  3. rs140622542[chr17:2861166]
Enhancers that have rs140622542[chr17:2861166]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs140622542[chr17:2861166]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2861166 2861170 LFA1 TRANSFAC yes 52789780
Genes associated with rs140622542[chr17:2861166], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More