EnhancerDB
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  3. rs140754274[chr1:16511887]
Enhancers that have rs140754274[chr1:16511887]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140754274[chr1:16511887]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16511871 16511892 IRF1 JASPAR yes 27032790
chr1 16511873 16511894 IRF1 JASPAR yes 27032791
chr1 16511877 16511898 IRF1 JASPAR yes 27032792
chr1 16511878 16511893 FOXP1 JASPAR yes 27032793
chr1 16511879 16511894 STAT2 JASPAR yes 27032794
chr1 16511881 16511902 IRF1 JASPAR yes 27032795
chr1 16511882 16511897 FOXP1 JASPAR yes 27032796
chr1 16511883 16511898 FOXP1 JASPAR yes 27032797
chr1 16511883 16511904 IRF1 JASPAR yes 27032798
chr1 16511885 16511906 IRF1 JASPAR yes 27032799
chr1 16511887 16511908 IRF1 JASPAR yes 27032800
Genes associated with rs140754274[chr1:16511887], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More