EnhancerDB
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  3. rs140844860[chr1:17885993]
Enhancers that have rs140844860[chr1:17885993]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs140844860[chr1:17885993]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17885990 17886005 TFAP2A JASPAR yes 27101704
chr1 17885990 17886005 TFAP2C JASPAR yes 27101705
chr1 17885991 17886005 GLIS2 JASPAR yes 27101706
chr1 17885991 17886005 GLIS3 JASPAR yes 27101707
chr1 17885992 17886005 TFAP2A JASPAR yes 27101708
chr1 17885992 17886005 TFAP2B JASPAR yes 27101709
chr1 17885992 17886005 TFAP2C JASPAR yes 27101710
chr1 17885993 17886004 EBF1 JASPAR yes 27101711
chr1 17885993 17886005 TFAP2A JASPAR yes 27101712
chr1 17885993 17886007 PLAG1 JASPAR yes 27101713
Genes associated with rs140844860[chr1:17885993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More