EnhancerDB
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  3. rs140900620[chr1:21657509]
Enhancers that have rs140900620[chr1:21657509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs140900620[chr1:21657509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21657501 21657511 TBR1 JASPAR yes 27297152
chr1 21657503 21657515 PKNOX1 JASPAR yes 27297153
chr1 21657503 21657515 PKNOX2 JASPAR yes 27297154
chr1 21657503 21657515 TGIF1 JASPAR yes 27297155
chr1 21657503 21657515 TGIF2 JASPAR yes 27297156
chr1 21657508 21657516 MEIS2 JASPAR yes 27297157
chr1 21657508 21657516 MEIS3 JASPAR yes 27297158
chr1 21657509 21657513 NFE TRANSFAC yes 27297159
Genes associated with rs140900620[chr1:21657509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More