EnhancerDB
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  3. rs140981417[chr1:54852040]
Enhancers that have rs140981417[chr1:54852040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs140981417[chr1:54852040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54852028 54852041 TFAP2A JASPAR yes 28981208
chr1 54852028 54852041 TFAP2B JASPAR yes 28981209
chr1 54852028 54852041 TFAP2C JASPAR yes 28981210
chr1 54852030 54852045 RFX5 JASPAR yes 28981211
chr1 54852036 54852040 LFA1 TRANSFAC yes 28981212
Genes associated with rs140981417[chr1:54852040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More