EnhancerDB
  1. Home
  2. SNP
  3. rs140989197[chr17:38772090]
Enhancers that have rs140989197[chr17:38772090]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38750565 38781175 enh17142
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs140989197[chr17:38772090]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38771556 38772186 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756753
chr17 38771556 38772186 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108257699
chr17 38771566 38772250 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756757
chr17 38771566 38772250 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108257703
chr17 38771723 38772233 CTCF UCSC Txn Factor no Conserved 108257715
chr17 38771766 38772242 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756770
chr17 38771766 38772242 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257717
chr17 38771821 38772181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756771
chr17 38771821 38772181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108257718
chr17 38771859 38772223 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756772
chr17 38771859 38772223 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108257719
chr17 38771891 38772181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756773
chr17 38771891 38772181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108257720
chr17 38771894 38772214 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756774
chr17 38771894 38772214 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257721
chr17 38771900 38772190 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108257722
chr17 38771900 38772190 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257723
chr17 38771906 38772186 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257724
chr17 38771914 38772184 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108257725
chr17 38771914 38772195 SMC3 UCSC Txn Factor no Conserved 108257726
chr17 38771925 38772195 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257727
chr17 38771931 38772172 RAD21 UCSC Txn Factor no Conserved 108257728
chr17 38771935 38772165 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257729
chr17 38771941 38772120 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257730
chr17 38771944 38772164 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108257731
chr17 38771953 38772137 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257732
chr17 38771957 38772156 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756775
chr17 38771957 38772156 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257733
chr17 38771964 38772116 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108257734
chr17 38771964 38772130 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756776
chr17 38771964 38772130 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108257735
chr17 38771970 38772148 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21756777
chr17 38771970 38772148 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108257736
chr17 38771971 38772155 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257737
chr17 38771972 38772110 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108257738
chr17 38771976 38772147 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108257739
chr17 38771991 38772107 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756779
chr17 38772087 38772093 ETS1 JASPAR yes 54232592
chr17 38772087 38772093 SPI1 JASPAR yes 54232593
Genes associated with rs140989197[chr17:38772090], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More