EnhancerDB
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  3. rs141096772[chr12:50920815]
Enhancers that have rs141096772[chr12:50920815]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs141096772[chr12:50920815]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50920807 50920818 CDX2 JASPAR yes 120838578
chr12 50920808 50920819 HOXA10 JASPAR yes 120838579
chr12 50920809 50920818 CDX1 JASPAR yes 120838580
chr12 50920809 50920819 HOXA13 JASPAR yes 120838581
chr12 50920809 50920819 HOXB13 JASPAR yes 120838582
chr12 50920809 50920819 HOXD13 JASPAR yes 120838583
chr12 50920809 50920830 IRF1 JASPAR yes 120838584
Genes associated with rs141096772[chr12:50920815], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More