EnhancerDB
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  3. rs141225410[chr1:116088372]
Enhancers that have rs141225410[chr1:116088372]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116084825 116092215 enh12178
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Breast Uterus Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs141225410[chr1:116088372]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116086979 116088494 ZNF274 GTRD no Bone Marrow (K562) 107823668
chr1 116086979 116088494 ZNF274 GTRD no Bone Marrow (K562) 107823669
chr1 116088352 116088728 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107823675
chr1 116088357 116088701 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331218
chr1 116088357 116088701 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107823676
chr1 116088359 116088769 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107823677
chr1 116088366 116088380 ONECUT2 JASPAR yes 31746687
chr1 116088366 116088380 ONECUT3 JASPAR yes 31746688
chr1 116088366 116088381 FOXP1 JASPAR yes 31746689
chr1 116088366 116088387 IRF1 JASPAR yes 31746690
chr1 116088367 116088382 FOXA1 JASPAR yes 31746691
chr1 116088368 116088379 FOXB1 JASPAR yes 31746692
chr1 116088368 116088379 FOXC1 JASPAR yes 31746693
chr1 116088368 116088380 FOXC2 JASPAR yes 31746694
chr1 116088369 116088381 FOXI1 JASPAR yes 31746695
chr1 116088369 116088689 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331219
chr1 116088369 116088689 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107823678
chr1 116088370 116088385 PRDM1 JASPAR yes 31746696
Genes associated with rs141225410[chr1:116088372], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More