EnhancerDB
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Enhancers that have rs141479489[chr1:235026227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs141479489[chr1:235026227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235026123 235027734 ZNF274 GTRD no Cervix (HeLa-S3) 21400020
chr1 235026158 235026692 ZNF274 GTRD no Liver (HepG2) 21400021
chr1 235026166 235026499 ZNF274 GTRD no Bone Marrow (K562) 21400022
chr1 235026191 235026627 ZNF274 GTRD no Bone Marrow (K562) 21400023
chr1 235026191 235026840 ZNF143 GTRD no Epithelial (MCF-7) 21400024
chr1 235026224 235026239 TFAP2C JASPAR yes 36326454
chr1 235026226 235026241 TFAP2A JASPAR yes 36326455
chr1 235026226 235026241 TFAP2C JASPAR yes 36326456
chr1 235026227 235026238 TFAP2A JASPAR yes 36326457
chr1 235026227 235026238 TFAP2B JASPAR yes 36326458
chr1 235026227 235026238 TFAP2C JASPAR yes 36326459
Genes associated with rs141479489[chr1:235026227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More