EnhancerDB
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  3. rs141491671[chr12:52617959]
Enhancers that have rs141491671[chr12:52617959]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 52617951 52618303 vista13468
VISTA
Transcript factors that have rs141491671[chr12:52617959]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52616921 52618080 ZNF143 GTRD no Epithelial (MCF-7) 21546873
chr12 52616921 52618080 ZNF143 GTRD no Epithelial (MCF-7) 108033753
chr12 52616924 52618047 ZNF143 GTRD no Epithelial (MCF-7) 21546874
chr12 52616924 52618047 ZNF143 GTRD no Epithelial (MCF-7) 108033754
chr12 52616933 52618176 ZNF143 GTRD no Epithelial (MCF-7) 21546875
chr12 52616933 52618176 ZNF143 GTRD no Epithelial (MCF-7) 108033755
chr12 52616971 52618210 ZNF143 GTRD no Epithelial (MCF-7) 21546877
chr12 52616971 52618210 ZNF143 GTRD no Epithelial (MCF-7) 108033756
chr12 52617005 52618050 ZNF143 GTRD no Epithelial (MCF-7) 21546879
chr12 52617005 52618050 ZNF143 GTRD no Epithelial (MCF-7) 108033758
chr12 52617056 52618035 ZNF143 GTRD no Epithelial (MCF-7) 21546880
chr12 52617056 52618035 ZNF143 GTRD no Epithelial (MCF-7) 108033759
chr12 52617131 52618027 ZNF143 GTRD no Epithelial (MCF-7) 21546882
chr12 52617131 52618027 ZNF143 GTRD no Epithelial (MCF-7) 108033760
chr12 52617153 52617995 ZNF143 GTRD no Epithelial (MCF-7) 21546883
chr12 52617153 52617995 ZNF143 GTRD no Epithelial (MCF-7) 108033761
chr12 52617455 52618007 ZBTB33 GTRD no Lung (A549) 108033762
chr12 52617895 52618225 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546891
chr12 52617895 52618225 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033763
chr12 52617920 52618184 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546892
chr12 52617920 52618184 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033764
chr12 52617942 52617963 IRF1 JASPAR yes 82406816
chr12 52617942 52617963 IRF1 JASPAR yes 120930469
chr12 52617945 52617959 IRF7 JASPAR yes 82406817
chr12 52617945 52617959 IRF8 JASPAR yes 82406818
chr12 52617945 52617959 IRF7 JASPAR yes 120930470
chr12 52617945 52617959 IRF8 JASPAR yes 120930471
chr12 52617946 52617961 PRDM1 JASPAR yes 82406819
chr12 52617946 52617961 PRDM1 JASPAR yes 120930472
chr12 52617948 52617963 FOXP1 JASPAR yes 82406820
chr12 52617948 52617963 FOXP1 JASPAR yes 120930473
chr12 52617949 52617960 FOXA1 JASPAR yes 82406821
chr12 52617949 52617960 FOXA1 JASPAR yes 120930474
chr12 52617949 52617970 IRF1 JASPAR yes 82406822
chr12 52617949 52617970 IRF1 JASPAR yes 120930475
chr12 52617951 52617962 FOXP2 JASPAR yes 82406823
chr12 52617951 52617962 FOXP2 JASPAR yes 120930476
chr12 52617953 52617967 SPIC JASPAR yes 82406824
chr12 52617953 52617967 STAT1 JASPAR yes 82406825
chr12 52617953 52617967 SPIC JASPAR yes 120930477
chr12 52617953 52617967 STAT1 JASPAR yes 120930478
chr12 52617953 52617968 STAT2 JASPAR yes 82406826
chr12 52617953 52617968 STAT2 JASPAR yes 120930479
Genes associated with rs141491671[chr12:52617959], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 53458388 53473204 - SPRYD3 ENSG00000167778.4 53473204 840429 Ovary 0.325401 12109