EnhancerDB
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  3. rs141572531[chr17:56076018]
Enhancers that have rs141572531[chr17:56076018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56068785 56080363 enh4497
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs141572531[chr17:56076018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56076003 56076018 NR2C2 JASPAR yes 55005358
chr17 56076008 56076020 PKNOX1 JASPAR yes 55005359
chr17 56076008 56076020 PKNOX2 JASPAR yes 55005360
chr17 56076008 56076020 TGIF1 JASPAR yes 55005361
chr17 56076008 56076020 TGIF2 JASPAR yes 55005362
chr17 56076009 56076019 TFAP4 JASPAR yes 55005363
chr17 56076013 56076021 MEIS2 JASPAR yes 55005364
chr17 56076013 56076021 MEIS3 JASPAR yes 55005365
chr17 56076014 56076018 NFE TRANSFAC yes 55005366
chr17 56076014 56076021 MEIS1 JASPAR yes 55005367
chr17 56076018 56076029 PHOX2A JASPAR yes 55005368
Genes associated with rs141572531[chr17:56076018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More