EnhancerDB
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  3. rs141729490[chr2:38928219]
Enhancers that have rs141729490[chr2:38928219]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs141729490[chr2:38928219]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38928212 38928227 TFAP2A JASPAR yes 73166778
chr2 38928219 38928232 SCRT2 JASPAR yes 73166779
chr2 38928219 38928234 SCRT1 JASPAR yes 73166780
Genes associated with rs141729490[chr2:38928219], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More