EnhancerDB
  1. Home
  2. SNP
  3. rs141775804[chr12:52543915]
Enhancers that have rs141775804[chr12:52543915]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs141775804[chr12:52543915]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52543909 52543921 TFAP2A JASPAR yes 120922270
chr12 52543909 52543921 TFAP2B JASPAR yes 120922271
chr12 52543909 52543921 TFAP2C JASPAR yes 120922272
chr12 52543909 52543924 TFAP2A JASPAR yes 120922273
chr12 52543909 52543924 TFAP2C JASPAR yes 120922274
chr12 52543910 52543919 TFAP2A JASPAR yes 120922275
chr12 52543911 52543920 TFAP2A JASPAR yes 120922276
Genes associated with rs141775804[chr12:52543915], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More