EnhancerDB
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  3. rs141805894[chr17:55505252]
Enhancers that have rs141805894[chr17:55505252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs141805894[chr17:55505252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55505249 55505267 IRF2 JASPAR yes 54954552
chr17 55505250 55505271 IRF1 JASPAR yes 54954553
chr17 55505252 55505267 PRDM1 JASPAR yes 54954554
chr17 55505252 55505267 STAT2 JASPAR yes 54954555
Genes associated with rs141805894[chr17:55505252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More