EnhancerDB
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  3. rs141900990[chr17:25807398]
Enhancers that have rs141900990[chr17:25807398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25791425 25838215 enh17063
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs141900990[chr17:25807398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25807381 25807402 IRF1 JASPAR yes 53634898
chr17 25807385 25807399 IRF7 JASPAR yes 53634899
chr17 25807385 25807399 IRF8 JASPAR yes 53634900
chr17 25807385 25807400 IRF9 JASPAR yes 53634901
Genes associated with rs141900990[chr17:25807398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More