EnhancerDB
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  3. rs142020550[chr1:19328419]
Enhancers that have rs142020550[chr1:19328419]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19322701 19342495 enh11568
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs142020550[chr1:19328419]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19328415 19328433 ESR1 JASPAR yes 27169452
chr1 19328416 19328426 SP1 JASPAR yes 27169453
chr1 19328416 19328436 ESR1 JASPAR yes 27169454
chr1 19328417 19328421 LFA1 TRANSFAC yes 27169455
Genes associated with rs142020550[chr1:19328419], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More