EnhancerDB
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  3. rs142038180[chr17:55631104]
Enhancers that have rs142038180[chr17:55631104]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142038180[chr17:55631104]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55631090 55631104 GATA2 JASPAR yes 54968724
chr17 55631094 55631106 GRHL1 JASPAR yes 54968725
chr17 55631095 55631105 TFCP2 JASPAR yes 54968727
Genes associated with rs142038180[chr17:55631104], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More