EnhancerDB
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Enhancers that have rs1420419[chr17:55617259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1420419[chr17:55617259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55617246 55617260 FOXF2 JASPAR yes 54966467
chr17 55617249 55617260 FOXP2 JASPAR yes 54966469
chr17 55617251 55617259 FOXD1 JASPAR yes 54966476
chr17 55617251 55617259 FOXG1 JASPAR yes 54966477
chr17 55617251 55617259 FOXO3 JASPAR yes 54966478
chr17 55617253 55617263 MAX JASPAR yes 54966479
chr17 55617254 55617264 CLOCK JASPAR yes 54966480
chr17 55617254 55617264 MAX JASPAR yes 54966481
chr17 55617256 55617261 MYC TRANSFAC yes 54966482
chr17 55617256 55617261 USF1 TRANSFAC yes 54966483
chr17 55617256 55617261 USF2 TRANSFAC yes 54966484
chr17 55617256 55617263 USF1 JASPAR yes 54966485
Genes associated with rs1420419[chr17:55617259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More