EnhancerDB
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  3. rs142137025[chr16:89380552]
Enhancers that have rs142137025[chr16:89380552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142137025[chr16:89380552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89380391 89381065 ZNF274 GTRD no Blood (GM12878) 21738056
chr16 89380391 89381065 ZNF274 GTRD no Blood (GM12878) 108225499
chr16 89380522 89381458 TCF7L2 GTRD no Colon (HCT116) 21738057
chr16 89380522 89381458 TCF7L2 GTRD no Colon (HCT116) 108225500
chr16 89380539 89380557 ESR2 JASPAR yes 12329924
chr16 89380548 89381204 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21738058
chr16 89380548 89381204 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108225501
chr16 89380550 89380565 TFAP2A JASPAR yes 12329925
chr16 89380550 89380565 TFAP2C JASPAR yes 12329926
chr16 89380551 89380562 TFAP2A JASPAR yes 12329927
chr16 89380551 89380562 TFAP2B JASPAR yes 12329928
chr16 89380551 89380562 TFAP2C JASPAR yes 12329929
chr16 89380552 89380561 TFAP2A JASPAR yes 12329930
Genes associated with rs142137025[chr16:89380552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More