EnhancerDB
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  3. rs142144389[chr12:50977171]
Enhancers that have rs142144389[chr12:50977171]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50971777 51003055 enh2348
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs142144389[chr12:50977171]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50977162 50977177 NR2C2 JASPAR yes 120847503
chr12 50977167 50977176 ZEB1 JASPAR yes 120847504
chr12 50977168 50977178 FIGLA JASPAR yes 120847505
chr12 50977168 50977178 TCF3 JASPAR yes 120847506
chr12 50977168 50977178 TCF4 JASPAR yes 120847507
chr12 50977169 50977178 SNAI2 JASPAR yes 120847508
chr12 50977170 50977175 USF2 TRANSFAC yes 120847509
Genes associated with rs142144389[chr12:50977171], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More