EnhancerDB
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  3. rs142173377[chr12:65026332]
Enhancers that have rs142173377[chr12:65026332]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142173377[chr12:65026332]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65026326 65026335 NFIX JASPAR yes 121418456
chr12 65026327 65026333 NFIC JASPAR yes 121418457
chr12 65026330 65026339 SNAI2 JASPAR yes 121418458
chr12 65026331 65026336 USF2 TRANSFAC yes 121418459
Genes associated with rs142173377[chr12:65026332], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More