EnhancerDB
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  3. rs142195403[chr16:85343205]
Enhancers that have rs142195403[chr16:85343205]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142195403[chr16:85343205]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85342397 85343313 TCF7L2 GTRD no Colon (HCT116) 21723115
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 21723116
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 108213643
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 108213644
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 108213645
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 21723117
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 108213646
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 108213647
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 108213648
chr16 85342734 85343322 TCF7L2 GTRD no Colon (HCT116) 21723118
chr16 85343199 85343209 MAX JASPAR yes 12045394
chr16 85343199 85343210 USF2 JASPAR yes 12045395
chr16 85343199 85343211 HES5 JASPAR yes 12045396
chr16 85343199 85343211 HES7 JASPAR yes 12045397
chr16 85343200 85343210 BHLHE40 JASPAR yes 12045398
chr16 85343200 85343210 HEY1 JASPAR yes 12045399
chr16 85343200 85343210 HEY2 JASPAR yes 12045400
chr16 85343200 85343210 MAX JASPAR yes 12045401
chr16 85343200 85343210 MLX JASPAR yes 12045402
chr16 85343200 85343210 MNT JASPAR yes 12045403
chr16 85343200 85343210 TFE3 JASPAR yes 12045404
chr16 85343200 85343210 TFEB JASPAR yes 12045405
chr16 85343200 85343211 USF1 JASPAR yes 12045406
chr16 85343200 85343211 USF2 JASPAR yes 12045407
chr16 85343201 85343211 MAX JASPAR yes 12045408
chr16 85343202 85343207 MYC TRANSFAC yes 12045409
chr16 85343202 85343207 USF1 TRANSFAC yes 12045410
chr16 85343202 85343207 USF2 TRANSFAC yes 12045411
chr16 85343202 85343209 USF1 JASPAR yes 12045412
Genes associated with rs142195403[chr16:85343205], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More