EnhancerDB
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  3. rs142205690[chr17:55620056]
Enhancers that have rs142205690[chr17:55620056]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 55618678 55620173 vista705
VISTA
Transcript factors that have rs142205690[chr17:55620056]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55620043 55620060 RARA JASPAR yes 16333
chr17 55620043 55620060 RARA JASPAR yes 54966911
chr17 55620050 55620062 PROX1 JASPAR yes 16334
chr17 55620050 55620062 PROX1 JASPAR yes 54966912
Genes associated with rs142205690[chr17:55620056], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More