EnhancerDB
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  3. rs142217411[chr1:232760706]
Enhancers that have rs142217411[chr1:232760706]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs142217411[chr1:232760706]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232760697 232760716 CTCF JASPAR yes 36178873
chr1 232760704 232760717 NR2F1 JASPAR yes 36178874
chr1 232760706 232760714 NR4A2 JASPAR yes 36178875
chr1 232760706 232760720 RXRB JASPAR yes 36178876
chr1 232760706 232760720 RXRG JASPAR yes 36178877
chr1 232760706 232760721 HNF4A JASPAR yes 36178878
Genes associated with rs142217411[chr1:232760706], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More