EnhancerDB
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  3. rs142223108[chr17:62984012]
Enhancers that have rs142223108[chr17:62984012]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142223108[chr17:62984012]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62983996 62984017 IRF1 JASPAR yes 55335814
chr17 62984000 62984021 IRF1 JASPAR yes 55335815
chr17 62984001 62984016 FOXP1 JASPAR yes 55335816
chr17 62984001 62984022 IRF1 JASPAR yes 55335817
chr17 62984002 62984017 FOXP1 JASPAR yes 55335818
chr17 62984002 62984023 IRF1 JASPAR yes 55335819
chr17 62984006 62984027 IRF1 JASPAR yes 55335820
chr17 62984007 62984022 FOXP1 JASPAR yes 55335821
chr17 62984009 62984024 FOXP1 JASPAR yes 55335822
chr17 62984011 62984026 FOXP1 JASPAR yes 55335823
chr17 62984012 62984027 FOXP1 JASPAR yes 55335824
Genes associated with rs142223108[chr17:62984012], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More