EnhancerDB
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  3. rs142295667[chr12:50936140]
Enhancers that have rs142295667[chr12:50936140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142295667[chr12:50936140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50936031 50936627 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21545244
chr12 50936031 50936627 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108031428
chr12 50936110 50936430 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21545245
chr12 50936110 50936430 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108031429
chr12 50936137 50936152 LEF1 JASPAR yes 120841050
chr12 50936138 50936152 TCF7L2 JASPAR yes 120841051
Genes associated with rs142295667[chr12:50936140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More