EnhancerDB
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  3. rs142315960[chr13:110888366]
Enhancers that have rs142315960[chr13:110888366]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 110865085 110921672 enh15492
Brain (SK-N-MC) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142315960[chr13:110888366]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 110888356 110888367 HOXA10 JASPAR yes 60326152
chr13 110888357 110888367 ALX3 JASPAR yes 60326153
chr13 110888357 110888367 GSX1 JASPAR yes 60326154
chr13 110888357 110888367 GSX2 JASPAR yes 60326155
chr13 110888357 110888367 HOXB2 JASPAR yes 60326156
chr13 110888357 110888367 HOXB3 JASPAR yes 60326157
chr13 110888357 110888367 MEOX2 JASPAR yes 60326158
chr13 110888357 110888367 MIXL1 JASPAR yes 60326159
chr13 110888357 110888367 MNX1 JASPAR yes 60326160
chr13 110888358 110888366 LMX1A JASPAR yes 60326161
chr13 110888358 110888366 LMX1B JASPAR yes 60326162
chr13 110888358 110888366 NKX6-1 JASPAR yes 60326163
chr13 110888358 110888366 NKX6-2 JASPAR yes 60326164
chr13 110888358 110888366 PDX1 JASPAR yes 60326165
chr13 110888358 110888366 VAX1 JASPAR yes 60326166
chr13 110888358 110888366 VAX2 JASPAR yes 60326167
chr13 110888358 110888366 VSX1 JASPAR yes 60326168
Genes associated with rs142315960[chr13:110888366], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More