EnhancerDB
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  3. rs142323494[chr2:28181472]
Enhancers that have rs142323494[chr2:28181472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28174945 28191595 enh18379
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 28181257 28181638 vista30805
VISTA
Transcript factors that have rs142323494[chr2:28181472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28181453 28181474 IRF1 JASPAR yes 22023586
chr2 28181453 28181474 IRF1 JASPAR yes 72602802
chr2 28181459 28181474 HNF1A JASPAR yes 22023587
chr2 28181459 28181474 HNF1A JASPAR yes 72602803
chr2 28181460 28181481 IRF1 JASPAR yes 22023588
chr2 28181460 28181481 IRF1 JASPAR yes 72602804
chr2 28181464 28181476 IRF1 JASPAR yes 22023589
chr2 28181464 28181476 IRF1 JASPAR yes 72602805
chr2 28181467 28181483 POU4F2 JASPAR yes 22023590
chr2 28181467 28181483 POU4F3 JASPAR yes 22023591
chr2 28181467 28181483 POU4F2 JASPAR yes 72602806
chr2 28181467 28181483 POU4F3 JASPAR yes 72602807
chr2 28181469 28181473 YY1 TRANSFAC yes 22023592
chr2 28181469 28181473 YY1 TRANSFAC yes 72602808
Genes associated with rs142323494[chr2:28181472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More