EnhancerDB
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  3. rs142424677[chr5:148821568]
Enhancers that have rs142424677[chr5:148821568]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148806414 148838675 enh22700
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 148821355 148824866 vista1379
VISTA
Transcript factors that have rs142424677[chr5:148821568]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148821560 148821578 TP53 JASPAR yes 66814508
chr5 148821560 148821578 TP53 JASPAR yes 111950260
chr5 148821561 148821581 TP53 JASPAR yes 66814509
chr5 148821561 148821581 TP53 JASPAR yes 111950261
chr5 148821567 148821587 TP53 JASPAR yes 66814510
chr5 148821567 148821587 TP53 JASPAR yes 111950262
Genes associated with rs142424677[chr5:148821568], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More