EnhancerDB
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  3. rs142439851[chr17:55618942]
Enhancers that have rs142439851[chr17:55618942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 55618678 55620173 vista705
VISTA
Transcript factors that have rs142439851[chr17:55618942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55618934 55618944 NFIA JASPAR yes 16152
chr17 55618934 55618944 NFIA JASPAR yes 54966730
chr17 55618936 55618942 NFIC JASPAR yes 16153
chr17 55618936 55618942 NFIC JASPAR yes 54966731
chr17 55618938 55618942 H1TF2 TRANSFAC yes 16154
chr17 55618938 55618942 NFE TRANSFAC yes 16155
chr17 55618938 55618942 SRF TRANSFAC yes 16156
chr17 55618938 55618942 H1TF2 TRANSFAC yes 54966732
chr17 55618938 55618942 NFE TRANSFAC yes 54966733
chr17 55618938 55618942 SRF TRANSFAC yes 54966734
Genes associated with rs142439851[chr17:55618942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More