EnhancerDB
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  3. rs142454534[chr11:19972998]
Enhancers that have rs142454534[chr11:19972998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 19970665 19987395 enh13835
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs142454534[chr11:19972998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 19971910 19976711 ZNF274 GTRD no Bone Marrow (K562) 107961388
chr11 19972001 19973987 ZNF274 GTRD no Bone Marrow (K562) 107961389
chr11 19972320 19974903 ZNF274 GTRD no Bone Marrow (K562) 107961390
chr11 19972850 19973813 ZNF274 GTRD no Bone Marrow (K562) 107961391
chr11 19972992 19973004 TEF JASPAR yes 37818234
chr11 19972993 19973006 DUXA JASPAR yes 37818235
chr11 19972994 19973005 DUX4 JASPAR yes 37818236
Genes associated with rs142454534[chr11:19972998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More