EnhancerDB
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  3. rs142456626[chr1:1609168]
Enhancers that have rs142456626[chr1:1609168]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs142456626[chr1:1609168]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1609069 1609701 RUNX3 UCSC Txn Factor no Conserved 107801794
chr1 1609164 1609176 ZBTB7A JASPAR yes 26197751
chr1 1609165 1609170 SP1 TRANSFAC yes 26197752
chr1 1609168 1609182 PLAG1 JASPAR yes 26197753
Genes associated with rs142456626[chr1:1609168], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More