EnhancerDB
  1. Home
  2. SNP
  3. rs142458852[chr2:235603796]
Enhancers that have rs142458852[chr2:235603796]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235581405 235605475 enh19346
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs142458852[chr2:235603796]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235603793 235603807 TCF7L2 JASPAR yes 81900130
chr2 235603793 235603808 LEF1 JASPAR yes 81900131
chr2 235603793 235603808 NR2C2 JASPAR yes 81900132
chr2 235603794 235603808 PLAG1 JASPAR yes 81900133
chr2 235603794 235603808 RXRB JASPAR yes 81900134
chr2 235603794 235603808 RXRG JASPAR yes 81900135
Genes associated with rs142458852[chr2:235603796], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More