EnhancerDB
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  3. rs142470940[chr1:204295241]
Enhancers that have rs142470940[chr1:204295241]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204280925 204295275 enh12578
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs142470940[chr1:204295241]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204295235 204295245 CLOCK JASPAR yes 34693037
chr1 204295235 204295245 HEY1 JASPAR yes 34693038
chr1 204295235 204295245 HEY2 JASPAR yes 34693039
chr1 204295235 204295245 MNT JASPAR yes 34693040
chr1 204295236 204295243 USF1 JASPAR yes 34693041
chr1 204295236 204295246 MAX JASPAR yes 34693042
chr1 204295236 204295256 TP63 JASPAR yes 34693043
chr1 204295237 204295242 MYC TRANSFAC yes 34693044
chr1 204295237 204295242 USF1 TRANSFAC yes 34693045
chr1 204295237 204295242 USF2 TRANSFAC yes 34693046
chr1 204295237 204295255 TP73 JASPAR yes 34693047
Genes associated with rs142470940[chr1:204295241], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More