EnhancerDB
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  3. rs142475433[chr17:12523450]
Enhancers that have rs142475433[chr17:12523450]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 12514965 12542595 enh16999
Skin (Keratinocyte) Liver (HepG2) Ovary Astrocyte Bone (Osteoblast) Placenta Uterus Muscle (Myoblast) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs142475433[chr17:12523450]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 12522171 12523727 ZNF143 GTRD no Epithelial (MCF-7) 21743104
chr17 12522171 12523727 ZNF143 GTRD no Epithelial (MCF-7) 108239342
chr17 12522187 12523595 ZNF143 GTRD no Epithelial (MCF-7) 21743105
chr17 12522187 12523595 ZNF143 GTRD no Epithelial (MCF-7) 108239343
chr17 12522221 12523831 ZBTB33 GTRD no Lung (A549) 108239344
chr17 12522240 12524173 ZBTB33 GTRD no Lung (A549) 108239345
chr17 12522253 12523552 ZNF143 GTRD no Epithelial (MCF-7) 21743107
chr17 12522253 12523552 ZNF143 GTRD no Epithelial (MCF-7) 108239346
chr17 12522279 12523734 ZBTB33 GTRD no Lung (A549) 108239348
chr17 12522315 12523753 ZBTB33 GTRD no Lung (A549) 108239349
chr17 12522330 12523648 ZBTB33 GTRD no Lung (A549) 108239350
chr17 12522334 12523620 ZBTB33 GTRD no Lung (A549) 108239351
chr17 12522429 12523609 ZNF143 GTRD no Epithelial (MCF-7) 21743109
chr17 12522429 12523609 ZNF143 GTRD no Epithelial (MCF-7) 108239353
chr17 12522434 12523649 ZBTB33 GTRD no Lung (A549) 108239354
chr17 12522469 12523764 ZBTB33 GTRD no Lung (A549) 108239355
chr17 12522543 12523694 ZBTB33 GTRD no Lung (A549) 108239357
chr17 12522589 12523596 ZNF274 GTRD no Cervix (HeLa-S3) 108239358
chr17 12522628 12523806 ZNF143 GTRD no Epithelial (MCF-7) 21743111
chr17 12522628 12523806 ZNF143 GTRD no Epithelial (MCF-7) 108239365
chr17 12522631 12523593 ZNF143 GTRD no Epithelial (MCF-7) 21743112
chr17 12522631 12523593 ZNF143 GTRD no Epithelial (MCF-7) 108239366
chr17 12522663 12523461 ZBTB33 GTRD no Lung (A549) 108239369
chr17 12522667 12523652 ZBTB33 GTRD no Lung (A549) 108239370
chr17 12522692 12523537 ZNF143 GTRD no Epithelial (MCF-7) 21743116
chr17 12522692 12523537 ZNF143 GTRD no Epithelial (MCF-7) 108239376
chr17 12522693 12523496 ZNF143 GTRD no Epithelial (MCF-7) 21743117
chr17 12522693 12523496 ZNF143 GTRD no Epithelial (MCF-7) 108239377
chr17 12522698 12523504 ZNF143 GTRD no Epithelial (MCF-7) 21743119
chr17 12522698 12523504 ZNF143 GTRD no Epithelial (MCF-7) 108239379
chr17 12522716 12523479 ZNF143 GTRD no Epithelial (MCF-7) 21743120
chr17 12522716 12523479 ZNF143 GTRD no Epithelial (MCF-7) 108239380
chr17 12522718 12523539 ZNF143 GTRD no Epithelial (MCF-7) 21743121
chr17 12522718 12523539 ZNF143 GTRD no Epithelial (MCF-7) 108239381
chr17 12522870 12523586 ZNF143 GTRD no Epithelial (MCF-7) 21743126
chr17 12522870 12523586 ZNF143 GTRD no Epithelial (MCF-7) 108239389
chr17 12523036 12523461 ZNF143 GTRD no Epithelial (MCF-7) 21743131
chr17 12523036 12523461 ZNF143 GTRD no Epithelial (MCF-7) 108239394
chr17 12523447 12523467 RREB1 JASPAR yes 53176764
Genes associated with rs142475433[chr17:12523450], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More