EnhancerDB
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  3. rs142478019[chr5:14235586]
Enhancers that have rs142478019[chr5:14235586]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 14197965 14242825 enh22053
Brain (SK-N-MC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142478019[chr5:14235586]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 14235581 14235592 CDX2 JASPAR yes 61027838
chr5 14235582 14235593 HOXA10 JASPAR yes 61027839
chr5 14235583 14235593 HOXA13 JASPAR yes 61027840
chr5 14235584 14235596 FOXI1 JASPAR yes 61027841
Genes associated with rs142478019[chr5:14235586], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More