EnhancerDB
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  3. rs142485981[chr17:78773350]
Enhancers that have rs142485981[chr17:78773350]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs142485981[chr17:78773350]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78773349 78773360 TBX20 JASPAR yes 56281375
chr17 78773350 78773358 MGA JASPAR yes 56281376
chr17 78773350 78773358 TBX15 JASPAR yes 56281377
chr17 78773350 78773358 TBX1 JASPAR yes 56281378
chr17 78773350 78773358 TBX4 JASPAR yes 56281379
chr17 78773350 78773358 TBX5 JASPAR yes 56281380
Genes associated with rs142485981[chr17:78773350], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More