EnhancerDB
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  3. rs142515327[chr17:39061516]
Enhancers that have rs142515327[chr17:39061516]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs142515327[chr17:39061516]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39061038 39061697 ZBTB33 GTRD no Lung (A549) 21757164
chr17 39061084 39061523 ZNF143 GTRD no Epithelial (MCF-7) 21757165
chr17 39061088 39061556 ZNF143 GTRD no Epithelial (MCF-7) 21757167
chr17 39061508 39061519 TBX20 JASPAR yes 54242487
chr17 39061510 39061518 MGA JASPAR yes 54242489
chr17 39061510 39061518 TBX15 JASPAR yes 54242490
chr17 39061510 39061518 TBX1 JASPAR yes 54242491
chr17 39061510 39061518 TBX4 JASPAR yes 54242492
chr17 39061510 39061518 TBX5 JASPAR yes 54242493
Genes associated with rs142515327[chr17:39061516], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More